PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT02912
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family GeBP
Protein Properties Length: 269aa    MW: 30497.5 Da    PI: 9.5568
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT02912genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57398.66e-3168158297
    DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 
               +f+rlws+eDei++L G++++++ ++ sps d +afy fvk++++++vsk+ql +K+ +LK Kf k+v+k       +fsk+h+++ f+ls++iW+
  OIT02912  68 NFKRLWSDEDEIAVLEGMLEYASARNISPSVDYNAFYIFVKDQLQVEVSKNQLKDKVNNLKSKFMKNVAK-----RGAFSKPHEENLFKLSQRIWD 158
               79*******************************************************************9.....679*****************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MASLNLSKNE KIMQKMAKNH TDNPLKESDK DWTPTSSESI SSESHSNSRK KRTMKNSGKK  60
GASEAVNNFK RLWSDEDEIA VLEGMLEYAS ARNISPSVDY NAFYIFVKDQ LQVEVSKNQL  120
KDKVNNLKSK FMKNVAKRGA FSKPHEENLF KLSQRIWDDD NQIAKEKGAT KVYDEVPKVG  180
KKIAAKEKNN LCAGSSERYS SLVLYGGSAA DLEDWFRQNP GLVSKEQRHE MLIKSHSMKI  240
ARAELQLNEI TLMEEQVNLM TDAVKASQE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.15e-23GeBP family protein