PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT03104
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ZF-HD
Protein Properties Length: 229aa    MW: 26076.5 Da    PI: 8.2223
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT03104genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer103.81.1e-3250105359
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                  k +YkeClkNhA+ +GghavDGCgEfmp+ ge+g+ +alkCaAC+CHRnFHR+e++ 
     OIT03104  50 KPKYKECLKNHAVGIGGHAVDGCGEFMPA-GEDGSLDALKCAACNCHRNFHRKETQI 105
                  679*************************9.999*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MEFETQDDQK EIRASPNYNS VLEISNSTDE PKMPSNSDEL ILDAPLQMRK PKYKECLKNH  60
AVGIGGHAVD GCGEFMPAGE DGSLDALKCA ACNCHRNFHR KETQIHHQPY YRHPPCGYFQ  120
HVMPQQRPLP LPSTSGGGGG GGYREDQEEM CNPNNSGTKK RFRTRFNQEQ KEKMLELAEK  180
LGWRIQRQDE GVVKQLCNEI GIKRHVFKVW MHNNKLTLGK KTLIQSTNP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.18e-67ZF-HD family protein