PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT03177
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family GATA
Protein Properties Length: 180aa    MW: 19603.3 Da    PI: 10.3803
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT03177genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.96.5e-192961133
      GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkk 33
              C+ CgttkTplWR gp g+k+LCnaCG++ rkk
  OIT03177 29 CADCGTTKTPLWRGGPAGPKSLCNACGIKSRKK 61
              *******************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MVDLSDKGIR SEELSSETSS AERNDVKTCA DCGTTKTPLW RGGPAGPKSL CNACGIKSRK  60
KIRALLGLNK EDKKPKKSMA FGNKSIGLQQ QSCNSSSYSS SGDSKNSNFG KKNVSSSLKR  120
EVFPFGKEVI LQRPRSSSTQ KRKLGEVEQA AFLLMALSCG SFCNKYNNYA SIRNKLESTI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.17e-33GATA family protein