PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT03307

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bHLH

Protein Properties

Length: 251aa MW: 29099.4 Da PI: 7.2837

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT03307	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.1	1.6e-13	84	133	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ah +Er+RR+++ + + Lr++lP + ++K s ++ Le+A++YI++L+ OIT03307 84 AHRDVERQRRQEMANLYTSLRSHLPLEF--LKGKRSASDHLEQAMNYIQHLE 133 8***********************65..9*****************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 251 aa Download sequence
MDPLSEIFSF HKIQEYDIYH QEIQIPSTPC QLPQQDLVKI IGTNSLPRND TIKKKRSRRL 60 LSSVSTESTS NETMDQNKLI RIIAHRDVER QRRQEMANLY TSLRSHLPLE FLKGKRSASD 120 HLEQAMNYIQ HLENSINDLE KKRDKLKLLA HYSNREDKES IHKYNLDEYL TVNPCQDGVE 180 ILIIKKFGKE GLPLSKVVEE LVKRKLNVVT CVSTKVDETS LHKIQVEVTD VSCMDVSTLE 240 EKLAEMILNL S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25410.1	6e-34	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIT03307