PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT03355

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NF-YB

Protein Properties

Length: 246aa MW: 27577.4 Da PI: 7.0299

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT03355	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	176.9	1.9e-55	71	166	2	97
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 +eqdrflPianv+rimkkv+P+n+kiskdaketvqecvsefisfvt+easdkcqrekrktingdd++wa++ lGf++yv+plk+yl+kyrelegek OIT03355 71 KEQDRFLPIANVGRIMKKVIPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAIGVLGFDEYVNPLKQYLNKYRELEGEK 166 89*******************************************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MEDDKRGILP NVAIKRSPEN NSNITIQTTP ITTTTTTSTF TNNCTNIKTE NNNNNNKCSS 60 SSSNNNNNNS KEQDRFLPIA NVGRIMKKVI PGNGKISKDA KETVQECVSE FISFVTGEAS 120 DKCQREKRKT INGDDIIWAI GVLGFDEYVN PLKQYLNKYR ELEGEKLNVP NKQHQQQQQQ 180 QQLHDHAHSP SLPNYNSVYN SPSGLGLPQP SFVSTDQSFP LPLISQNSIQ SQLSQQEQQI 240 DSVGHW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G13570.1	2e-58	NF-YB family protein

Link Out ? help Back to Top
Ensembl	OIT03355