PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT03505
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 221aa    MW: 24096.5 Da    PI: 4.3045
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT03505genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63.1e-182171256
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
              +ykGVr +k +g+Wv+e+r p++   r r++lg+++tae+Aa+a +aa  +l+ge
  OIT03505 21 KYKGVRKRK-WGKWVSEVRLPNS---RERIWLGSYDTAEKAARAFDAAQFCLRGE 71
              8*****999.*******999833...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MVKPIKSSDD ISSSSSSSSL KYKGVRKRKW GKWVSEVRLP NSRERIWLGS YDTAEKAARA  60
FDAAQFCLRG EAAKLNFPAN PPDILNGRSM SAAEIQVAAA RFANSDPEPQ ESISGPTDNS  120
DLSFSSSLSS SSELLHPESP STSISDGMVQ PDGELTEMPL DSEFLDLFFS LGTANNEYHF  180
GSFSEISDLT GDHFLPALND IDSGKEIYDG CTLDGSFLWN F
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12329KGVRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.15e-45ERF family protein