PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT03553

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 469aa MW: 52166.9 Da PI: 6.9925

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT03553	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	113.6	2.1e-35	48	193	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra...........tksgy 82 lp+G++F+Ptd+el+ e+L++kv +k+ ++++ i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+ + + OIT03553 48 LPAGVKFDPTDQELI-EHLEAKVLAKEskshplIDEFIPtIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKiqtecqdlqaaGGETR 146 799**********.99999996665443333333666646******.555666799**************86777777765433778 PP NAM 83 WkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l OIT03553 147 WHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 193 ********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MSKSSHQLGS ISSSDLIDAK LEEHQLCGSK QCPGCGHKLE GKPDWVGLPA GVKFDPTDQE 60 LIEHLEAKVL AKESKSHPLI DEFIPTIEGE DGICYTHPEK LPGVTRDGLS RHFFHRPSKA 120 YTTGTRKRRK IQTECQDLQA AGGETRWHKT GKTRPVMVNG KQKGCKKILV LYTNFGKNRK 180 PEKTNWVMHQ YHLGQHEEEK EGELVVSKIF YQTQPRQCNW SNTTTSTAAG GEASSDLNSR 240 RDSGSGSCSS SKDINNNIPS SHRDELSAVC AAMSSYTTMD IQQFKPEHFS FLPFRKSFDE 300 AGIVVGEASM AREGGSAAAA AAPVGTSDAR DIHEPHHVTH DQQLHQHQHQ HQHHHQVATA 360 SFHISRPSPP ISAIITPPPL HNTSIILGHD DAFHVPRSII LPNENFQQQQ QQQHHKLEGR 420 SASELEQLIM GCTSTDIKGD QSSITNPQDA DWLKYSHFWP DPDNPDHHA

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MSKSSHQLGS ISSSDLIDAK LEEHQLCGSK QCPGCGHKLE GKPDWVGLPA GVKFDPTDQE  60
LIEHLEAKVL AKESKSHPLI DEFIPTIEGE DGICYTHPEK LPGVTRDGLS RHFFHRPSKA  120
YTTGTRKRRK IQTECQDLQA AGGETRWHKT GKTRPVMVNG KQKGCKKILV LYTNFGKNRK  180
PEKTNWVMHQ YHLGQHEEEK EGELVVSKIF YQTQPRQCNW SNTTTSTAAG GEASSDLNSR  240
RDSGSGSCSS SKDINNNIPS SHRDELSAVC AAMSSYTTMD IQQFKPEHFS FLPFRKSFDE  300
AGIVVGEASM AREGGSAAAA AAPVGTSDAR DIHEPHHVTH DQQLHQHQHQ HQHHHQVATA  360
SFHISRPSPP ISAIITPPPL HNTSIILGHD DAFHVPRSII LPNENFQQQQ QQQHHKLEGR  420
SASELEQLIM GCTSTDIKGD QSSITNPQDA DWLKYSHFWP DPDNPDHHA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-165	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT03553