PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT03724

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bHLH

Protein Properties

Length: 255aa MW: 28321.1 Da PI: 9.0396

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT03724	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	45.4	1.4e-14	84	130	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN+ +++Lr+llP+ +K +Ka+ L ++++++k+L OIT03724 84 KSHSEAERRRRERINNHLSKLRSLLPST-----TKTDKASLLAEVIQHVKEL 130 79***********************9.....8**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MGEAGNNSGF MFPEMSPLLP QSINTLHFPS NQIHYYDPFN LFTSVPSPYG GLFNRRSSPF 60 GLQDELQKVS GKEIMDAKAL AASKSHSEAE RRRRERINNH LSKLRSLLPS TTKTDKASLL 120 AEVIQHVKEL KTQTSQITDT NSVPTEMDEL TVDNYSSEEE GNFVIKASLC CEDRSDLLPD 180 LINTLKSLRL RTLKAEITTL GGRVKNVLFI TQSKSINDDQ LQYSLSSIQE ALKAVIKKSS 240 GTSGSVKRQI KGLLS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	90	95	ERRRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	8e-77	bHLH family protein

Link Out ? help Back to Top
Ensembl	OIT03724