PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT03733
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Dof
Protein Properties Length: 286aa    MW: 30768.7 Da    PI: 10.3217
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT03733genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof117.84.1e-373591561
    zf-Dof  5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
               +kcprCds+ntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGggrrk k +
  OIT03733 35 PQKCPRCDSNNTKFCYYNNYSLTQPRYFCKTCRRYWTQGGTLRNVPVGGGRRKGKCT 91
              689**************************************************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MEQGRSGGES DRNQQRRMKM PENLSPAAQP PQPPPQKCPR CDSNNTKFCY YNNYSLTQPR  60
YFCKTCRRYW TQGGTLRNVP VGGGRRKGKC TTRGGGGSSS SSAGESSSRS SQGAQLPPVV  120
PLHNMTTNLS AAAAFFSGNS ISRSQPLNSL YSSGGFLSSL AAMQSQGVNQ PSNSQFGGTS  180
NTVLLQGFHN LPKEPQQTGF YQMVNREKSN ESSFYLSDQT LQFQHTRPLG SWTQRFINNN  240
TNNNMASWNS SAGSSSGSGG ATNSTTAGSS LSPNQWPDMP GFGPSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.12e-26Dof family protein