PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT03754
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 201aa    MW: 21719 Da    PI: 4.5246
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT03754genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.62.4e-163886255
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
               ++G+r++  +g+Wv+eIr+p++   ++r++lg+f t+e+Aa+a++ a+++l+g
  OIT03754 38 NFRGIRQR--NGKWVSEIREPRK---TTRIWLGTFSTPEMAAAAYDVAALALKG 86
              589**975..6*********843...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MADHFFNVTP SDNPPPSENF SPTGSASGNV LSPRRHPNFR GIRQRNGKWV SEIREPRKTT  60
RIWLGTFSTP EMAAAAYDVA ALALKGPDAP LNFPDSAYSY PVPASLSAVD IRAAAANAAA  120
ARAPPISESN SHEVLAYTGN YEGASTTVAA TFVDEEEIFG MPKLLDEMAE AMLVSPPRMH  180
QSTSYDESPE NSDADNLWSY P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.17e-47ERF family protein