PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT03783
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 154aa    MW: 17321.5 Da    PI: 9.6749
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT03783genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.42.1e-1956108156
       AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.kr.krfslgkfgtaeeAakaaiaarkklege 56 
               ++y+GVr+++ +g+++AeIrd      ++ +r++lg+f taeeAa a+++a+ +++g+
  OIT03783  56 KKYRGVRRRP-WGKYAAEIRD----SaRHgARVWLGTFETAEEAALAYDRAAFRMRGA 108
               59********.**********....33236**************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MVPTPQSDLP LNENDSQEMV LYEVLNEANA LNVPYLPQRN QLLPKNVLRP SQIIGKKYRG  60
VRRRPWGKYA AEIRDSARHG ARVWLGTFET AEEAALAYDR AAFRMRGAKA LLNFPSEVVT  120
ASASVDRLLL RPPSLSSDSY TNSNNSNSAF KWDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.11e-31ERF family protein