PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT04023
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 89aa    MW: 10329.8 Da    PI: 9.9038
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT04023genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.61.9e-10347345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     +WTt   +++ +a +++ ++   +W+ Iar++g g+++++++ ++ 
         OIT04023  3 SWTTRQNKKFEEALALFDKEtpdRWHNIARCVG-GKSAEEVRRHYE 47
                     6*****************99*************.**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 89 aa     Download sequence    
MASWTTRQNK KFEEALALFD KETPDRWHNI ARCVGGKSAE EVRRHYELLV KDIMQIENGQ  60
VPLPNYKAVG SNSRGYANEQ RLLKNLKLQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.22e-38MYB_related family protein