PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT04079

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

TALE

Protein Properties

Length: 656aa MW: 73664 Da PI: 6.5897

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT04079	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.3	1.4e-09	456	493	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps++++ L++++gL+++qV++WF N R + OIT04079 456 FEHflHPYPSEADKHLLSRQTGLSKNQVSNWFINARVR 493 554459******************************88 PP
2	BELL	108.9	3e-35	316	387	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 er e q++k kLls+l+eVd rY +y+eq+q++++sF+ ++g+g+a+pYt+lA+ka+SrhFrc+kdai+ q+ OIT04079 316 ERSEYQRRKIKLLSMLDEVDARYTRYCEQMQAMVNSFDSMIGYGAAAPYTALAQKAMSRHFRCIKDAIVAQL 387 789******************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 656 aa Download sequence
MSQSFQQGFY NFSSVYERSA TKHEDMLRIQ GFEPLPPPPQ QVEEPPGAVY DGGGMLTEII 60 SYPSAWRKAA TEILDDQIQS SNYRPWPQKE QQQQQLPPSI NEVELPLMNS HIKASSPPRS 120 SSSLHMLLPN SADTNSLLHH QGFHLLNSAA VEPPSQFTWV PGSSSGEDNS TRIGRVVDGQ 180 GLSLSLSRNF EAAAKLEDLR IGNGGIYLNN NQGLFGAINN NNNHHQLLHS GVVTTPHSNH 240 QVHVGYATAS PRMTNVLRNS RYVKAAQELL EEFCCVGRGN FKNQRVKKYE DENPNSNAES 300 EDRGSSKDHP PLSAAERSEY QRRKIKLLSM LDEVDARYTR YCEQMQAMVN SFDSMIGYGA 360 AAPYTALAQK AMSRHFRCIK DAIVAQLRQT CKYLGEKDVT GSGGLTKGET PRLKMLDQKL 420 RQQKALHQMG VLDSDAWRPQ RGLPERSVNV LRAWLFEHFL HPYPSEADKH LLSRQTGLSK 480 NQVSNWFINA RVRLWKPMVE EMYQQETKEE ETDQDQEEEE EQEKQLSAQT SMHDKISNMA 540 TSATTTPTMP LSVRSEFNDN ERDLSKNIIN YRQYALGNQL VMLQDDTATA SSATHDVSTT 600 VNRYFTAADA ADLVANSNAT FGSQPAGDVS LTLGLRHSEN VPRKTTQFHL RDFGAY

Sequence ? help Back to Top

Protein Sequence Length: 656 aa Download sequence

MSQSFQQGFY NFSSVYERSA TKHEDMLRIQ GFEPLPPPPQ QVEEPPGAVY DGGGMLTEII  60
SYPSAWRKAA TEILDDQIQS SNYRPWPQKE QQQQQLPPSI NEVELPLMNS HIKASSPPRS  120
SSSLHMLLPN SADTNSLLHH QGFHLLNSAA VEPPSQFTWV PGSSSGEDNS TRIGRVVDGQ  180
GLSLSLSRNF EAAAKLEDLR IGNGGIYLNN NQGLFGAINN NNNHHQLLHS GVVTTPHSNH  240
QVHVGYATAS PRMTNVLRNS RYVKAAQELL EEFCCVGRGN FKNQRVKKYE DENPNSNAES  300
EDRGSSKDHP PLSAAERSEY QRRKIKLLSM LDEVDARYTR YCEQMQAMVN SFDSMIGYGA  360
AAPYTALAQK AMSRHFRCIK DAIVAQLRQT CKYLGEKDVT GSGGLTKGET PRLKMLDQKL  420
RQQKALHQMG VLDSDAWRPQ RGLPERSVNV LRAWLFEHFL HPYPSEADKH LLSRQTGLSK  480
NQVSNWFINA RVRLWKPMVE EMYQQETKEE ETDQDQEEEE EQEKQLSAQT SMHDKISNMA  540
TSATTTPTMP LSVRSEFNDN ERDLSKNIIN YRQYALGNQL VMLQDDTATA SSATHDVSTT  600
VNRYFTAADA ADLVANSNAT FGSQPAGDVS LTLGLRHSEN VPRKTTQFHL RDFGAY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36870.2	1e-124	TALE family protein

Link Out ? help Back to Top
Ensembl	OIT04079