PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT04109

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Dof

Protein Properties

Length: 231aa MW: 23840.3 Da PI: 7.1777

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT04109	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.2	4.3e-39	25	83	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++l+cprCdstntkfCyynny+lsqPr+fCk+CrryWt+GG+lrn+PvGgg+rkn ++ OIT04109 25 PENLPCPRCDSTNTKFCYYNNYNLSQPRHFCKSCRRYWTRGGTLRNIPVGGGTRKNSSH 83 57899**************************************************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MSSEVGDRRQ ARLPAPANGT RPSEPENLPC PRCDSTNTKF CYYNNYNLSQ PRHFCKSCRR 60 YWTRGGTLRN IPVGGGTRKN SSHKRPRNTT SVTPQESVNA TPITMVGSGQ ASGSGSVSFM 120 GCEVNLNESV QEAGGATNGT FTSLLTGPVG GGFVPLGGFG LGLGGFGLGN LDWPMEQVGG 180 GNGGGGDGGE NMKWQLSSGE IEGGGGGGIG DDDCFGNWPD LAISAPGTSL K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50410.1	1e-33	Dof family protein

Link Out ? help Back to Top
Ensembl	OIT04109