PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT04138
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 234aa    MW: 26889.1 Da    PI: 10.2212
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT04138genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B360.43e-19133219498
               E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
        B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                ++ps+v+   +l lp +f++++   ++++ t+tl de+g++W   +  +k++    l++GWk+F+ +++L +gD +vF+l++ ++f  +v ++r
  OIT04138 133 SMLPSHVSGGFWLGLPSNFCRKNL--PRRDDTITLIDETGEEWPTVYLAQKNG----LSGGWKKFAVDHDLADGDAIVFHLIRPTKF--KVYIIR 219
               689*****************9995..346679***************555555....9************************97777..888877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MVMSKVKYEK LRQQRLEENK KRMEELNLPL LTQALKISSS PKPSPMKKVK PRIIRTELVS  60
VRRSPRVANK PAPEYKEVIY YERVMIPRRM STPRKRDSLN MVYATDEERA ASIEKAEKLE  120
ASLGPDYPIL VRSMLPSHVS GGFWLGLPSN FCRKNLPRRD DTITLIDETG EEWPTVYLAQ  180
KNGLSGGWKK FAVDHDLADG DAIVFHLIRP TKFKVYIIRV NNVSESESTE TSTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.17e-65B3 family protein