PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT04166
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 203aa    MW: 23371 Da    PI: 4.4374
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT04166genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B335.91.3e-11100180189
               EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
        B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
               f+ v ++ ++ + + l++p+k   +h  ++  ++++ l + +g++W v +  + +++r  +++GWk Fv +n +k+g +v F+l++ s+
  OIT04166 100 FEVV-MTDSYINYDDLYIPRKIY-KHL-PP--TVEIALLHYRGKEWFVSM--SVGDRR-RFKEGWKLFVLDNYVKQGFIVKFMLVDVSS 180
               4444.5666666667*******9.663.32..468***************..555444.4899********************987555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MDASPSTKRA LFYSSTSSDD KSYSSTSSDN EEEIPPTFEV IMSDSCIDYN DLSHTLIYSN  60
TKDLKNSLLQ TLTMDASYST KRALTYSSTS DDEEENHPTF EVVMTDSYIN YDDLYIPRKI  120
YKHLPPTVEI ALLHYRGKEW FVSMSVGDRR RFKEGWKLFV LDNYVKQGFI VKFMLVDVSS  180
LYVDFNVEVK GEGTLDRNSV EID