PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT04167
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 108aa    MW: 12791.8 Da    PI: 7.6026
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT04167genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.51.6e-10783386
              EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
        B3  3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86
               vl++ ++ k++ + +pk+  e++ ++        + +  g++W + +  + + +r +l++GWk+F   n++k g  + F+l++
  OIT04167  7 EVLLKDSYIKQDYMHIPKRLYEHIPES--H--STAVVQYGGKEWFMGI--NIGERR-WLKDGWKDFMMNNDIKRGCLIKFELVE 83
              677889999999*********777533..2..4566688*********..666655.8***********************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    
DKNPTFEVLL KDSYIKQDYM HIPKRLYEHI PESHSTAVVQ YGGKEWFMGI NIGERRWLKD  60
GWKDFMMNND IKRGCLIKFE LVEIVQLFVF FKVQVKGQGT PQDPVEIN