PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT04186
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family WOX
Protein Properties Length: 235aa    MW: 26895.3 Da    PI: 9.5535
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT04186genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.43.9e-2196155357
               --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
  Homeobox   3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
               +R+++t+eq+ +Le l++   r+p+a+++e+++ +l    +++ ++V++WFqN++a+e++
  OIT04186  96 TRWNPTQEQIGILEMLYRGgMRTPNAQQIEQITVQLgkygKIEGKNVFYWFQNHKARERQ 155
               7*****************99**************************************97 PP
2Wus_type_Homeobox117.18e-3896157465
  Wus_type_Homeobox   4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 
                        tRW+Pt+eQi iLe+ly+ G+rtPn+++i++it +L +yGkie+kNVfyWFQN+kaRerqkq
           OIT04186  96 TRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITVQLGKYGKIEGKNVFYWFQNHKARERQKQ 157
                        8***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    
MYMGSSSGSL SMKVHQFTRG LILEHDSATP SLTLGCKRLR PLAPKLSTCT NDPTIVTPPF  60
DLKSFIRPES STSPRKTSFN DDKKDSSQVE SHPGGTRWNP TQEQIGILEM LYRGGMRTPN  120
AQQIEQITVQ LGKYGKIEGK NVFYWFQNHK ARERQKQKRN SLGLSQSPRT PPAIVTSPLS  180
FDTRGEVVRE EDSPYKRKCR GWTYEYLEEE EKRNCREDNG DRTLELFPLH PEGMR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46480.19e-78WOX family protein