PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT04286

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 255aa MW: 29486 Da PI: 5.76

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT04286	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	59.6	1e-18	7	146	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLp.k...kvkaeekewy.fFskrdkkyatgkrknr.atksgyWkatgkdkevlsk 95 GfrF+Ptd+e + +L + v+g++++ + + ++vd+y k ePw++ + + + e++ y +F+++ kk++ + r +r + ++g+Wk+ k k+v+ k OIT04286 7 EGFRFRPTDSEGL-MFLLRFVAGQEMHDAGFiTTNVDVYgKQEPWEIYdHgvpCGDDEDSTSYrYFITKLKKKS-NARYHRsVGNKGTWKQDNKGKPVHYK 105 6*********99.789999999998877773567799456***743555333344444424444444444.5677775888**********99 PP NAM 96 ......kgel..vglkktLvfykg..rapkgektdWvmheyrl 128 + + +g k+ L + ++ ++ + +W+m+ey+l OIT04286 106 nmgntsS--VvnIGSKTNLSYKNKefYPEDQKDGHWLMKEYEL 146 6655433..156*****95532455666789****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MEQLGQEGFR FRPTDSEGLM FLLRFVAGQE MHDAGFITTN VDVYGKQEPW EIYDHGVPCG 60 DDEDSTSYRY FITKLKKKSN ARYHRSVGNK GTWKQDNKGK PVHYKNMGNT SSVVNIGSKT 120 NLSYKNKEFY PEDQKDGHWL MKEYELSKVI LHKFDEDRRD YVLCAIKKLK HVNSTYETST 180 TTTMLHFDQS VLPDMHSNSA HVVYSEVTDH MTYMSQINSK KVPEDVLGLD PWDIMDSDEL 240 NRMLEDVSEC CSDGC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77450.1	2e-10	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT04286