PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT04505
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 289aa    MW: 32493.8 Da    PI: 5.2534
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT04505genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.86.1e-11113158555
               HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               h + Er+RR+++ + f  L ++lP +     kK++Ka+ L  +++Y+k+Lq
  OIT04505 113 HAILERKRRQKLTQLFISLSKILPGL-----KKMDKASLLGDTIQYMKELQ 158
               999***********************.....9******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MAKDGMNYDG LSHQGSIDDF LLEDDFFNPN PILSEMYSTL SPTCIIENNA QKALISPPSS  60
SSSSSCSEVL ISFSTPTKRD VEKSYFDPLT NHFEESTENN NIYKKNSVEA GDHAILERKR  120
RQKLTQLFIS LSKILPGLKK MDKASLLGDT IQYMKELQQR VKFLEKEIKN NPSKRSLAAK  180
VPSDVSLSQG SDYSSNEEDI VPEINVRVFD KSALINIYCN KQNGVVGRIV SEMEKLHLSV  240
RDMNIMSFCR TSLDISIVSE MENGFDVNVE DIVKAFQSKL SGEVHCLRL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117122ERKRRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-40bHLH family protein