PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT04569
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 180aa    MW: 20250.7 Da    PI: 4.9218
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT04569genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.2e-201869156
       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
              s y+GVr +k +g+Wv+eIr+p   gk++r++lg+f+t+e+Aa+a++ a++ l+g+
  OIT04569 18 SPYRGVRKRK-WGKWVSEIREP---GKKTRIWLGSFDTPEMAAAAYDSAALHLKGH 69
              68*****999.**********8...557***********************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MEENNNTSKP SRRAGVTSPY RGVRKRKWGK WVSEIREPGK KTRIWLGSFD TPEMAAAAYD  60
SAALHLKGHA AKLNFPELVE FLPKPTSCSP DDIRFAAQEA ALKVKRNSQE MASSSATNNL  120
APVTIGLSPS QIQAINDFPM DSPKMWSDVT REYVGEETMF TCNDYEMSDY EEMDDCLWDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.15e-39ERF family protein