PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT04601
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 148aa    MW: 16619.6 Da    PI: 8.6486
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT04601genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.43.2e-171766255
       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
              +y+G+r++k +g+Wv+eIr+p   g +  r +lg++ t+e Aa a++ a  +l+ 
  OIT04601 17 KYRGIRRRK-WGKWVSEIRVP---G-SsERLWLGTYTTPEAAAVAHDIAYYCLRE 66
              8*****998.**********8...4.34***********************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MSSSDERGSS TSAHQRKYRG IRRRKWGKWV SEIRVPGSSE RLWLGTYTTP EAAAVAHDIA  60
YYCLRESSSL GKLNFPFMLP VNVDRGMSPR SVQKVASDAG MAIDAKLVTS YTTEKGRQQE  120
MNDHICQSVD NNGQSEALSI SVEDYLYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.11e-46ERF family protein