PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT05023
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ZF-HD
Protein Properties Length: 87aa    MW: 9481.61 Da    PI: 8.3871
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT05023genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer1054.7e-332479258
  ZF-HD_dimer  2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                 +++rY eC++NhAa++Gg+avDGC+Efm+s ge+gt+aal+CaACgCHRnFHRrev+
     OIT05023 24 RNIRYVECQRNHAANIGGYAVDGCREFMAS-GEDGTTAALTCAACGCHRNFHRREVD 79
                 579**************************9.999********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    
MMKKRQVVVR TDGSRRNIGG SSTRNIRYVE CQRNHAANIG GYAVDGCREF MASGEDGTTA  60
ALTCAACGCH RNFHRREVDG GEVVSEC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18835.17e-25ZF-HD family protein