PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT05031

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

TALE

Protein Properties

Length: 432aa MW: 48848 Da PI: 6.8892

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT05031	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.6	1.1e-09	359	396	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +e+ LA+++gL+++qV++WF N R + OIT05031 359 FEHflHPYPNDSEKLMLASQTGLSKNQVSNWFINARVR 396 554459******************************88 PP
2	BELL	100	1.8e-32	221	292	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 er+el k+ kL++lleeV++rY+qy+ + + s Fe++ag g+ kpYt+lAl+a+SrhF cL+dai++qi OIT05031 221 ERHELYVKIMKLITLLEEVERRYEQYYRHMDEITSTFEVIAGFGAGKPYTALALQAMSRHFSCLRDAIISQI 292 799********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 432 aa Download sequence
MVSTDSPPPT HSSILHQFIN SDSITSQIGS QHFDIYQSGL SANTTTYQPP GVLSRSIEFV 60 NPTHFTTDSD VNNSRHLMDL LGASHDANQQ AQRLSLSLSS HSLVSSLNCR ERALSSSFTN 120 PSYISQEIDH RNNEFSFSAA AMNQSFSNVC GTESFVSAIG NSKYLKPAQS LLEELVCAGG 180 KTTDLSNEKF IRRLSRNSKK GSLSLRAMLK AEIPSNELFN ERHELYVKIM KLITLLEEVE 240 RRYEQYYRHM DEITSTFEVI AGFGAGKPYT ALALQAMSRH FSCLRDAIIS QIYVIRQKMP 300 RDVPKISSGL SHLSLFEKET LQNRMSLQQL GIIQSNRQAW RPIRGLPETS VAILRSWLFE 360 HFLHPYPNDS EKLMLASQTG LSKNQVSNWF INARVRLWKP MIEEMYKEEF AESSVDSDPF 420 LNREGVTDSA EE

Sequence ? help Back to Top

Protein Sequence Length: 432 aa Download sequence

MVSTDSPPPT HSSILHQFIN SDSITSQIGS QHFDIYQSGL SANTTTYQPP GVLSRSIEFV  60
NPTHFTTDSD VNNSRHLMDL LGASHDANQQ AQRLSLSLSS HSLVSSLNCR ERALSSSFTN  120
PSYISQEIDH RNNEFSFSAA AMNQSFSNVC GTESFVSAIG NSKYLKPAQS LLEELVCAGG  180
KTTDLSNEKF IRRLSRNSKK GSLSLRAMLK AEIPSNELFN ERHELYVKIM KLITLLEEVE  240
RRYEQYYRHM DEITSTFEVI AGFGAGKPYT ALALQAMSRH FSCLRDAIIS QIYVIRQKMP  300
RDVPKISSGL SHLSLFEKET LQNRMSLQQL GIIQSNRQAW RPIRGLPETS VAILRSWLFE  360
HFLHPYPNDS EKLMLASQTG LSKNQVSNWF INARVRLWKP MIEEMYKEEF AESSVDSDPF  420
LNREGVTDSA EE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75430.1	1e-91	TALE family protein

Link Out ? help Back to Top
Ensembl	OIT05031