PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT05060
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 200aa    MW: 22272.1 Da    PI: 8.0592
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT05060genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.21.2e-19553153
       AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
              ++++GVr+++ +g+WvAeIr+p        +r++lg+f taeeAa+a+++a+  +
  OIT05060  5 KKFRGVRQRH-WGSWVAEIRHP-----LlkRRVWLGTFETAEEAARAYDEAAVLM 53
              59*******9.**********8.....334*********************9765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MVQAKKFRGV RQRHWGSWVA EIRHPLLKRR VWLGTFETAE EAARAYDEAA VLMSGRNAKT  60
NFPVAALNEN GKDNNNNANS SFSGSSSSSL SAILSAKLRK CCKSPSPSLT CLRLDTESSS  120
IGVWQKRAGA RPDSSWVMTV ELGKKKINDN EPTLDGEQEK DIVTASIPET SMEKLEGEER  180
GMNEEERMAL QMIEELLNRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.12e-60ERF family protein