PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT05064
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family FAR1
Protein Properties Length: 329aa    MW: 37714.6 Da    PI: 5.0083
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT05064genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR127.41.1e-08122199191
      FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
               +fY+e+A+  GF  +k++s+k+   + +   ++ C ++ k+++             ++r +C+a+++  +e++g w+ +k++++ +H+l p
  OIT05064 122 DFYKEHARLSGFCNVKRTSNKK-GGDIVRYVQYGCDRSRKPKHV------------TKRRNCRARINGILEENGSWRFSKVVKKYSHQLEP 199
               6***********9999998887.56668999****999888764............46799***************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MNANLETSFE PLNPNNNLET RSEQLRNALH ISFGLNSDDS LMNEDESVNI DSNSNFNDGE  60
DHVDDADAAA DDDDDDDDDD HYLEEEGECG EDREMSNESN DEDLVIGPIT GMRFSNKDVM  120
FDFYKEHARL SGFCNVKRTS NKKGGDIVRY VQYGCDRSRK PKHVTKRRNC RARINGILEE  180
NGSWRFSKVV KKYSHQLEPA LSRMMARHRS LSKSLKRTLV AKDIAGLRPS KNIRVAEVLA  240
GGPENLGCTS KDCRNYILKS RKLQLQEGDA QSLLQFFSDM QQKDREFYYS VDVDSFGRLR  300
NVVWVHSHSK VAYEEFHDVI FLDTTYLVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.13e-25FAR1 family protein