PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT05113
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 224aa    MW: 25726.5 Da    PI: 7.4279
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT05113genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM104.71.2e-3227654129
       NAM  54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
               +e+ewyfF  rd+ky+tg r+nrat++gyWk+tgkdke+++ +g ++g+kktLvfy+gra+kgekt+W+mheyrle
  OIT05113   2 GEEEWYFFNLRDRKYPTGLRTNRATEAGYWKTTGKDKEIFQ-GGMVIGMKKTLVFYRGRASKGEKTNWIMHEYRLE 76 
               578**************************************.9*******************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MGEEEWYFFN LRDRKYPTGL RTNRATEAGY WKTTGKDKEI FQGGMVIGMK KTLVFYRGRA  60
SKGEKTNWIM HEYRLETNLA FKPSKEEWVV CRVFQKSSTT KKAQPTSSSQ QSLESPNCDT  120
NCTISNEIIG DFELPNMISI ASPSNYGINN TYLHNYNNEN YMNMNFSAAT RSEGASNINI  180
PFLPNSSNLS SSVNSIFEND FTSNHSVQQQ QAQEQSYKLD YNIW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.15e-62NAC family protein