PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT05436
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 304aa    MW: 35214.7 Da    PI: 6.6031
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT05436genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.71.9e-52141381128
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101
               lp+GfrFhPtdeelv++yL++k++g+++++ ++i+e+d+yk++Pw+Lp+k+ ++ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk+v +   ++ g
  OIT05436  14 LPAGFRFHPTDEELVQHYLCRKCAGQPISV-SIIAEIDLYKFDPWQLPEKALHGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKPVGK--PKTLG 111
               799***************************.89***************8888899*************************************98..778** PP

       NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
               +kk Lvfy g+ap+g kt+W+mheyrl
  OIT05436 112 IKKALVFYAGKAPRGIKTNWIMHEYRL 138
               *************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MIKGVHRNQQ QLELPAGFRF HPTDEELVQH YLCRKCAGQP ISVSIIAEID LYKFDPWQLP  60
EKALHGEKEW YFFSPRDRKY PNGSRPNRAA GTGYWKATGA DKPVGKPKTL GIKKALVFYA  120
GKAPRGIKTN WIMHEYRLAN VDRSAGKSNS LRLDDWVLCR IYNKKGTLEM HYNVDNKEHL  180
GFEEVEEEEE KPKILPFSQS NELIAPLAPA PMPPRPQSMP TRDYFHFETS ESMTRMHTTN  240
SSSGSEPSCD KEVQSAPKWD DLDNALDFQL NYLDSFQYDP FEQNCNIDQF NSFQDMFVYM  300
QKPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-116NAC family protein