PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT05595
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 278aa    MW: 32076.5 Da    PI: 8.9391
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT05595genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM173.37e-54101351128
       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101
               lppGfrFhPtdeel+++yL+++++++++++ ++i+evd+yk++Pw+Lp+k++ +e+ewyfF++rd+ky++g r+nra+ sgyWkatg+dk+++s +++ vg
  OIT05595  10 LPPGFRFHPTDEELIMYYLRNQATSRRCPV-SIIPEVDVYKFDPWELPEKAEFGEREWYFFTPRDRKYPNGVRPNRAAVSGYWKATGTDKAIYS-GSKYVG 108
               79****************************.89***************99999*****************************************.999*** PP

       NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
               +kk Lvfykgr pkg ktdW+mheyrl
  OIT05595 109 IKKALVFYKGRPPKGIKTDWIMHEYRL 135
               *************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MVGKNNSEQL PPGFRFHPTD EELIMYYLRN QATSRRCPVS IIPEVDVYKF DPWELPEKAE  60
FGEREWYFFT PRDRKYPNGV RPNRAAVSGY WKATGTDKAI YSGSKYVGIK KALVFYKGRP  120
PKGIKTDWIM HEYRLSESRS QPIRPNGSMR LDDWVLCRIY KKKNLGRAME MMKVEEETHQ  180
PEILSTNPVE IVAATGPQTL KLPRTCSLSH LLEIDYFGSI SQLFDDNSYN ANNQNTMTNI  240
NIGNVPHHAM EQLSHQYMAS TNVNGNVPIF VNPAFQFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.11e-112NAC family protein