PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT05643
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ZF-HD
Protein Properties Length: 213aa    MW: 24129.2 Da    PI: 9.1308
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT05643genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer102.33.2e-3246103359
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRrevee 59 
                  +v+YkeClkNhAas+Gg++vDGCgEf+ps++++ +++++lkC  CgCHRnFHRre+++
     OIT05643  46 AVTYKECLKNHAASIGGYTVDGCGEFIPSPDATvADPTSLKCDVCGCHRNFHRREPDD 103
                  799******************************9*********************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MDSTCSIPTP TPIPTKTQVP LKPLSFTNVT SKKHHQVHNH QPPSAAVTYK ECLKNHAASI  60
GGYTVDGCGE FIPSPDATVA DPTSLKCDVC GCHRNFHRRE PDDDFMDFRH HHAQVATPAT  120
PTALKPENPR RRRRFRTKFS QEQKDKMYSF SETLGWKLQK CDEATVEEFC NEIGVDKGVF  180
RVWMHNNKST WGKKVFQNAN STRPYPTTTT SKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15210.14e-53ZF-HD family protein