PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT05675
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 79aa    MW: 8911.97 Da    PI: 8.8937
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT05675genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding347e-11852344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WT+ E +++ +a + + ++   +W  Ia+++g g++ +++k ++
         OIT05675  8 AWTPKENKKFEQALAVYDKDtpdRWQNIAKYVGGGKSVEDVKQHY 52
                     7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 79 aa     Download sequence    
MASNSLSAWT PKENKKFEQA LAVYDKDTPD RWQNIAKYVG GGKSVEDVKQ HYAILIEDLK  60
HIESGDVPFP KYRSGGNSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.27e-32MYB_related family protein