PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT05852

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

Dof

Protein Properties

Length: 464aa MW: 51077.9 Da PI: 5.949

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT05852	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123	9.7e-39	113	171	2	60
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 ++k+l+cprC+s++tkfCy+nny++sqPr+fCk+C+ryWt+GG++rnvPvG+grrk+k+ OIT05852 113 PDKILPCPRCNSMETKFCYFNNYNVSQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKHKN 171 7899****************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 464 aa Download sequence
MSEAIANKDP AIKLFGRTIQ LPDFPAPSPA DTGDYSSLAG EAELEHKGQS DDCKDENEHL 60 IAEELQDRNP IPEQSDIIEE SPSYNDCSTA KTSKSEEEQA ETSNSQEKIL KKPDKILPCP 120 RCNSMETKFC YFNNYNVSQP RHFCKNCQRY WTAGGTMRNV PVGAGRRKHK NPVFHYRHIS 180 VSETLTDLSN GIQPPPLKLN GTILAFDTDK PLRESMGSVL SIADKTMQNC SGNGFHRYKE 240 LGIQGGDNGD DRSDGSSVTA LSSKDSDNGS PDMPRQNCDS FSPHLPCFTG APWPYPWSSV 300 HLSNAVPPPG YYLPGFPMPF VPAYWGCAVP GSWNVPWMSP PTASQNQMPP TSSPNSPTLR 360 KHPRDEIILK SMGSEEEPRK ESNPPEKCLW FPKTLRIGDP GEAAKSSIWS TLGIKHDVVD 420 SVSGGSFKAF LPKSDERNHV SENSSVLKAN PAAMSRSLNF NESS

Sequence ? help Back to Top

Protein Sequence Length: 464 aa Download sequence

MSEAIANKDP AIKLFGRTIQ LPDFPAPSPA DTGDYSSLAG EAELEHKGQS DDCKDENEHL  60
IAEELQDRNP IPEQSDIIEE SPSYNDCSTA KTSKSEEEQA ETSNSQEKIL KKPDKILPCP  120
RCNSMETKFC YFNNYNVSQP RHFCKNCQRY WTAGGTMRNV PVGAGRRKHK NPVFHYRHIS  180
VSETLTDLSN GIQPPPLKLN GTILAFDTDK PLRESMGSVL SIADKTMQNC SGNGFHRYKE  240
LGIQGGDNGD DRSDGSSVTA LSSKDSDNGS PDMPRQNCDS FSPHLPCFTG APWPYPWSSV  300
HLSNAVPPPG YYLPGFPMPF VPAYWGCAVP GSWNVPWMSP PTASQNQMPP TSSPNSPTLR  360
KHPRDEIILK SMGSEEEPRK ESNPPEKCLW FPKTLRIGDP GEAAKSSIWS TLGIKHDVVD  420
SVSGGSFKAF LPKSDERNHV SENSSVLKAN PAAMSRSLNF NESS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	3e-94	Dof family protein

Link Out ? help Back to Top
Ensembl	OIT05852