PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT05898
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 217aa    MW: 24158.6 Da    PI: 6.6839
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT05898genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.37.9e-1894144255
       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
               +y GVr+++ +g+++AeIrdp  +g  +r +lg++ t+e+Aa a+++a+ k++g
  OIT05898  94 RYIGVRRRP-WGKFAAEIRDPERRG--ARLWLGTYETPEDAALAYDQAAFKIRG 144
               699******.**********84444..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MNPADNATFS FSDLDFLDSI EHHLLNDSDF SNSFSPISSS NVANPNSPSS SFGSCLLDEN  60
IEETTTLESQ SEPEEQTQGG RAAREGNTKQ NWRRYIGVRR RPWGKFAAEI RDPERRGARL  120
WLGTYETPED AALAYDQAAF KIRGSRARLN FPHLIGSNMP EPARVKGRRH NSCSLEPSSS  180
SSTTSSENGT RKRNIEVINS IAKAKLVGHI RDLEMTL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.15e-40ERF family protein