PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT06338
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ZF-HD
Protein Properties Length: 306aa    MW: 34435 Da    PI: 8.4952
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT06338genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer110.21.1e-34111169260
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                  ++vrY+eClkNhAas+Ggh++DGCgEfmpse+eegt++alkCaAC+CHRnFHRre+e e
     OIT06338 111 SSVRYRECLKNHAASTGGHVLDGCGEFMPSEEEEGTPQALKCAACDCHRNFHRRETEAE 169
                  579***************************9999*********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MEQKGQEKEM GMPKSMGYNP SQVHQHESSS LSDRRNEKAG SGNVILIPIQ TLNKHNHHSK  60
NGHSQQNSHQ LEEERDPNLD LDPLTAANNR AQLRPQSTTS GNGTTTTTTS SSVRYRECLK  120
NHAASTGGHV LDGCGEFMPS EEEEGTPQAL KCAACDCHRN FHRRETEAET QIARAGPPYS  180
TFNPSTHSSN YCHNYKYSHS TGPPVMMMTF GGNSESSSED LNLFNSNVGG GQVVTQPNSK  240
SKKRFRTKFT AEQKERMHEF AEKVGWSIQK KDEQELQHFC NEVGVKRQVF RIWMHNSKQA  300
NKKRQM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.11e-59ZF-HD family protein