PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT06705

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NF-YB

Protein Properties

Length: 165aa MW: 17935 Da PI: 5.0648

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT06705	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	179.6	2.8e-56	26	123	1	98
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegekk 98 vre+dr+lPian++rimkk+lPanaki+k+ak+tvqecvsefisf+tseasdkcq+ekrktingddl+wal+tlGfedy+eplk+yl +yre+eg++k OIT06705 26 VREHDRYLPIANIGRIMKKALPANAKIAKEAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLVWALTTLGFEDYIEPLKAYLIRYREMEGDTK 123 589********************************************************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence
MAEAPASPGG GGSHESGGER SPQSNVREHD RYLPIANIGR IMKKALPANA KIAKEAKDTV 60 QECVSEFISF ITSEASDKCQ KEKRKTINGD DLVWALTTLG FEDYIEPLKA YLIRYREMEG 120 DTKGSARGGD GPARIDIVGG QLDSSTQFVY EGSFTHGLDY GNSQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53340.1	8e-72	NF-YB family protein

Link Out ? help Back to Top
Ensembl	OIT06705