PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT06730

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 196aa MW: 22411.8 Da PI: 4.7075

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT06730	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	117.1	1.7e-36	8	127	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelv 100 lppGfrF Ptdeelvv++L++k++ +++ +vi+++d+y ++PwdL+ k+ ae ++wyf+s+r + +r+t +gyWk+ g d++++s+ + +v OIT06730 8 LPPGFRFYPTDEELVVHFLHRKAALLPCHP-DVIPDLDLYPYDPWDLDGKAMAEGNKWYFYSRRTQ--------SRITGNGYWKSLGLDEPIFSSsSCDKV 99 79***********************999.99**********977778899**9854........799*************9855677 PP NAM 101 glkktLvfykgrapkgektdWvmheyrl 128 g+kk +fy g+ p+g+kt+Wvm+e++l OIT06730 100 GIKKYYAFYIGEPPEGVKTNWVMQEFSL 127 **************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
MGDNNVNLPP GFRFYPTDEE LVVHFLHRKA ALLPCHPDVI PDLDLYPYDP WDLDGKAMAE 60 GNKWYFYSRR TQSRITGNGY WKSLGLDEPI FSSSSCDKVG IKKYYAFYIG EPPEGVKTNW 120 VMQEFSLSDS SSSSSSGTSR SSSRRRSRSK IDYSKWVICR VHERNCDNDD DDGTELSCLD 180 EVFLSLDDLD EISLPH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64530.1	1e-78	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT06730