PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT06751

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

TCP

Protein Properties

Length: 248aa MW: 26068.9 Da PI: 8.518

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT06751	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	122.8	3.8e-38	31	123	3	89
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg.....k 89 +kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++ ++s ++s+ +ss + k OIT06751 31 VKKPPAKDRHSKVDGRGRRIRMPIVCAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTIPASFStLSVSLRNSSVSSSVSapldyK 123 79******************************************************************8886444444333322222333321 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MSTSVEANGA TLSSHTQQHS SDAGNNGALV VKKPPAKDRH SKVDGRGRRI RMPIVCAARV 60 FQLTRELGHK SDGQTIEWLL RQAEPSIIAA TGTGTIPASF STLSVSLRNS SVSSSVSAPL 120 DYKSSSQPSI SPAPFLLGKR LRPEDDDGSG EKDDASNGAT VVGPTPGFWA VPARSDFGQV 180 WSFAPPPPPE MVAPTHSSAA RFLQQQMGEE SAARLGNYFP IAQGHLNLLA SLSGSAPPSS 240 GRRDDDGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	2e-67	TCP family protein

Link Out ? help Back to Top
Ensembl	OIT06751