PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT07076

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

NAC

Protein Properties

Length: 180aa MW: 21012.6 Da PI: 8.1776

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT07076	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	66.2	9.4e-21	9	146	5	128
NAM 5 frFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk.........kvkaeekew.yfFskrdkkyatgkrknr.atksgyWkatgkdkev 92 +rF+Ptd+e + +yL + +++++++ + + +++d+y ePw++ + +a+++++ yf +k +kk+++ nr + ++g Wk++ k k+v OIT07076 9 IRFRPTDSERL-KYLLRFIAKQEMNDSGIiTTNIDVYGGeEPWEIYNhgvpcgnddD-NADSSNYrYFITKLKKKSKS--GYNReVGNKGSWKQQDKAKSV 105 49******9.999999999998887883556698659**744677665431.22223332666655555443..445547889******** PP NAM 93 lsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++ +g+kk+L + +++ + + +Wvm+ey+l OIT07076 106 RYEntgnsSSVIIGCKKSLCYVNKEYYNQNDGHWVMKEYEL 146 998666545555*********9999**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 180 aa Download sequence
MEHLQEGFIR FRPTDSERLK YLLRFIAKQE MNDSGIITTN IDVYGGEEPW EIYNHGVPCG 60 NDDDNADSSN YRYFITKLKK KSKSGYNREV GNKGSWKQQD KAKSVRYENT GNSSSVIIGC 120 KKSLCYVNKE YYNQNDGHWV MKEYELSSVI LQKFDEDRRD YVLCAIKKMP HSADYARCLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	2e-11	NAC family protein

Link Out ? help Back to Top
Ensembl	OIT07076