PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT07127
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 81aa    MW: 8790.76 Da    PI: 8.9667
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT07127genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.53.7e-09853244
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     g+WTt   + + +a + + ++   +W+ +a+ +g g+t+ ++k ++
         OIT07127  8 GSWTTKQNKAFEKALAVYDKDtpdRWSNVAKAVGGGKTAAEVKRHY 53
                     79*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    
MSSSQAQGSW TTKQNKAFEK ALAVYDKDTP DRWSNVAKAV GGGKTAAEVK RHYEILVHDI  60
MFIENGGVPF PNYTGGGTTN N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39250.11e-24MYB_related family protein