PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT07129
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family MYB_related
Protein Properties Length: 96aa    MW: 10951.2 Da    PI: 7.6894
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT07129genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.22.1e-09753144
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     r++WT++  +l+ +a +q+ ++   +W  +ar +g g++  ++k ++
         OIT07129  7 RNSWTPQQNKLFERALAQFDKDtpdRWQNVARAVGGGKSVDEIKRHY 53
                     789*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MASNSIRNSW TPQQNKLFER ALAQFDKDTP DRWQNVARAV GGGKSVDEIK RHYEILIEDL  60
RRIESGLVPL PTYTNGGNTG VAADEEQRLL RYLNLH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.18e-33MYB_related family protein