PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OIT07160

Organism

Nicotiana attenuata

Taxonomic ID

49451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana

Family

bZIP

Protein Properties

Length: 406aa MW: 42997.2 Da PI: 7.4672

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OIT07160	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	64.1	2.5e-20	302	364	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L+ el++l+ e ++l +++ OIT07160 302 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRAELSRLRSEHDQLAAQN 364 89*******************************************************999887 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
MGSSDIDKSS KEAKESKEAK TPNSQEQASS TATGTVNPEW SGFQGYSPMP PHGFLASGPQ 60 AHPYMWGVQH LMPPYGTPPH PYVAMYPHGG IYAHPSIPPG SYPFSPFAMP SPNSVAEAAV 120 NASGNAEVDG KSSEGKEKLP IKRSKGSLGS LNMITGKNNE PGKTSGASAN GAYSKSAESG 180 SEGSSEGSDA NSQNESPMKS AGRQDSAEAS QNGNSAHSSQ NGGTRAPHSL INQTMPIMPM 240 SAAGGIPGPT TNLNIGMDYW SAAASPSMPA IHGKVPSASV TGGMVTAGSR DIVQSQMWIQ 300 DERELKRQRR KQSNRESARR SRLRKQAECD ELAQRAEALK EENASLRAEL SRLRSEHDQL 360 AAQNASLKER LGEVPGQEDP RPSRNDIHLG KDTQHSSQTE PTQGGQ

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

MGSSDIDKSS KEAKESKEAK TPNSQEQASS TATGTVNPEW SGFQGYSPMP PHGFLASGPQ  60
AHPYMWGVQH LMPPYGTPPH PYVAMYPHGG IYAHPSIPPG SYPFSPFAMP SPNSVAEAAV  120
NASGNAEVDG KSSEGKEKLP IKRSKGSLGS LNMITGKNNE PGKTSGASAN GAYSKSAESG  180
SEGSSEGSDA NSQNESPMKS AGRQDSAEAS QNGNSAHSSQ NGGTRAPHSL INQTMPIMPM  240
SAAGGIPGPT TNLNIGMDYW SAAASPSMPA IHGKVPSASV TGGMVTAGSR DIVQSQMWIQ  300
DERELKRQRR KQSNRESARR SRLRKQAECD ELAQRAEALK EENASLRAEL SRLRSEHDQL  360
AAQNASLKER LGEVPGQEDP RPSRNDIHLG KDTQHSSQTE PTQGGQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	319	325	RRSRLRK
2	319	326	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	1e-150	bZIP family protein

Link Out ? help Back to Top
Ensembl	OIT07160