PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT07162
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 99aa    MW: 11505.4 Da    PI: 8.078
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT07162genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.53.7e-11474986
              HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
        B3  9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86
              ++ k++ l +pk f e++ +      t  + +  g++W + l  + + +r +l++GWk+Fv  n++k g  v F+l++
  OIT07162  4 SYIKQDYLHIPKCFYEHIPEA----HTSAVLQCGGKEWFMGL--NVGERR-WLKDGWKSFVMKNNIKRGCLVKFELVE 74
              6678899********777533....25567788*********..777766.8***********************865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 99 aa     Download sequence    
LKDSYIKQDY LHIPKCFYEH IPEAHTSAVL QCGGKEWFMG LNVGERRWLK DGWKSFVMKN  60
NIKRGCLVKF ELVEIAQILV VFKVEVKGQG THEDPVEIN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06220.15e-08B3 family protein