PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT07400
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family B3
Protein Properties Length: 90aa    MW: 10243.2 Da    PI: 9.6603
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT07400genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B336.77.4e-1215801890
              --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
        B3 18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90
              lpk+ +   g+ ++ s++++l+  +g++W v+l    ++ +  l +GWk+Fv +n+Lk g +++F+l++ +++
  OIT07400 15 LPKNIC---GYLPPISVKIILRC-NGKEWAVTL---TSGVWRRLVNGWKQFVVDNNLKKGSVLLFELVQVTSG 80
              455555...66678899999877.9********...3444556999*********************998776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    
MNPEPYLYIM FLQFLPKNIC GYLPPISVKI ILRCNGKEWA VTLTSGVWRR LVNGWKQFVV  60
DNNLKKGSVL LFELVQVTSG VVIFSIEVLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.12e-06B3 family protein