PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT07494
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family GATA
Protein Properties Length: 369aa    MW: 41209.7 Da    PI: 6.7899
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT07494genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.11.1e-17261295135
      GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
               C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  OIT07494 261 CLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRL 295
               99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    
METPEFFQTS YYNSQFTPEK RLSDAKNGDH FVVEDLLDLP NDDGMVTDGT LDATVTGNSV  60
DSSVVDNSCN SSLSGSNHDP QLTVDNIIGC RNFPDGQFSS EFSVPYDDLA ELEWLSNFVE  120
ESFSSNEMQK IQFIQGMKSR NDNEPHQFIP DPNNNRASAA TNPIFNPDMS VPAKARSKRS  180
RMAPGNWASR LLVVSPNSPN NTPNSPMNTT TMQDMSSSSE SGIISSSGKK TVKSSTPKIK  240
KENTQHVPNN NIASNNEGRK CLHCATDKTP QWRTGPMGPK TLCNACGVRY KSGRLVPEYR  300
PAASPTFVLT KHSNSHRKVL EIRRQKEIVR THQHQQQQQF LPQNMMFDVS SADDYLIHQH  360
IGPDFRHLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.11e-74GATA family protein