PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT07576
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bHLH
Protein Properties Length: 216aa    MW: 24393.6 Da    PI: 8.8889
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT07576genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.95.8e-111642041055
               HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
       HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
               r+RR+riN+++  L++l+P+      +K++ +++Le+Av+Y+k Lq
  OIT07576 164 RKRRERINERLRILQSLVPNG-----TKVDISTMLEEAVQYVKFLQ 204
               9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MWIRSCCDLN NTILIVKDIE IMESGENMPE SDLHGKGLQL GREYDQMQVR EQDHKMDSLS  60
ESSKKRSRLP TNDVPKNKRS VKPKKNMKSI VDDEIGNKEN NSNVLHRQSS FSCCSEDESN  120
VSNYDLYGLA SSDNSKGVSA PLNSIGKSRA SRGSATDPQS LYARKRRERI NERLRILQSL  180
VPNGTKVDIS TMLEEAVQYV KFLQLQIKVI TLLSSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.12e-30bHLH family protein