PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT07586
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family GATA
Protein Properties Length: 150aa    MW: 16616.4 Da    PI: 10.5152
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT07586genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.93.2e-192154134
      GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
              C+ C+ttkTplWR gp g+k+LCnaCG++yrkk+
  OIT07586 21 CTDCKTTKTPLWRVGPYGPKSLCNACGIKYRKKK 54
              ********************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MDPTLKEDSL DSETTESTKS CTDCKTTKTP LWRVGPYGPK SLCNACGIKY RKKKGTPSGF  60
SKDPEKKKKA TDISISCTDN LAHSQKDKVG KDGKLSKGLR VRFMMLGKEV VILQRQRSSM  120
KKKPTKHRKF GEVERAALLL MALSCGSVFA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15169RKKKGTPSGFSKDPEKKKK
25270RKKKGTPSGFSKDPEKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.11e-20GATA family protein