PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT07705
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family Dof
Protein Properties Length: 242aa    MW: 25645.6 Da    PI: 8.4158
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT07705genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.51.4e-382382362
    zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
               ++l+cprCdstntkfCyynny+ sqPr+fCk+CrryWt+GG+lr++PvGgg+rkn k+s
  OIT07705 23 PEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRS 82
              57899***************************************************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MPSDVSERKA TKQQQGGAPA PEPEHLPCPR CDSTNTKFCY YNNYNFSQPR HFCKSCRRYW  60
THGGTLRDIP VGGGSRKNAK RSRTITTNNT SSSCLSSTLS PRDYHHAPTP SHVSPFLVPL  120
TADHHGGPLP FDVKPNGNMC GSFTSLLSNT QGSHGLLALS GFGLGVGPAI EDMGFGLGRP  180
IWPFPGVVSH TSVDHSNSNG AGASMLGNTW QLASGEGGFV GAGGDCFNFP DLAISTHGNG  240
MK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50410.16e-47Dof family protein