PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT07768
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 186aa    MW: 20959.3 Da    PI: 8.8595
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT07768genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.54.6e-2092142255
       AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
               +y+GVr+++ +g+++AeIrdp   + k++r +lg++ t+e+Aa a+++a+ k++g
  OIT07768  92 RYRGVRRRP-WGKFAAEIRDP---NkKNARLWLGTYETPEDAALAYDQAAFKIRG 142
               8********.**********9...5467*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MNSADLSLLE SIQHHLLNDS NIPEIFSAMD SNSPSSSFSN SPSTENNFYY GELTPLINPT  60
LVATEKFHEF EETNNKETVP ANVANAPQDW KRYRGVRRRP WGKFAAEIRD PNKKNARLWL  120
GTYETPEDAA LAYDQAAFKI RGSKARLNFP HLVGSGMPEP ARVNPRRRSH SPESSSENGT  180
PRKLFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-39ERF family protein