PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT07769
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 144aa    MW: 16585.9 Da    PI: 10.7813
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT07769genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.82.6e-183989255
       AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
              +y+GVr+++ +g+++AeIr p     k +r +lg++ t+e+Aa a+++a+ k++g
  OIT07769 39 RYRGVRRRP-WGKFAAEIRNP---DrKGARLWLGTYETPEDAALAYDQAAYKIRG 89
              7********.**********8...3245*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    
MLTSINSSWE RVDKLEHKEE TKEKHVVARG VHAPQDWNRY RGVRRRPWGK FAAEIRNPDR  60
KGARLWLGTY ETPEDAALAY DQAAYKIRGS KARLNFPHLI GSNISEPVRV APRRRCLSPE  120
ISSSSFSLSF VENVTLKKRK LAEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.13e-44ERF family protein