PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OIT07826
Organism
Nicotiana attenuata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 201aa    MW: 23238.5 Da    PI: 6.1418
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OIT07826genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-1895146155
       AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
               ++ykGVr+++ +g+++AeIrdp     k +r +lg++ t+e+Aa a+++ + kl+g
  OIT07826  95 KKYKGVRRKP-WGKYAAEIRDP---ErKGARLWLGTYETPEDAALAYDRTAFKLRG 146
               59*****888.**********7...3235*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MQGISLEFDQ QNFLDPMQHD LFNDPDFSQI FSELNSFNNT IQTPRNPSSE NTIFAQNMVQ  60
HNQEKYADDH IVPLQETSSE NNKELSSDQV PLEKKKYKGV RRKPWGKYAA EIRDPERKGA  120
RLWLGTYETP EDAALAYDRT AFKLRGSRAV LNFPHLIESN VTEINIVRPR RRSRSPDIEL  180
SSDQNDGPIS KRRNVDLINS X
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.12e-41ERF family protein